BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002E03SP1|AL424971
(957 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig510 1771 0.0
>3x_Contig510
Length = 2210
Score = 1771 bits (880), Expect = 0.0
Identities = 911/936 (97%)
Strand = Plus / Minus
Query: 18 catagtttttggtaacttcagtggataattccggagctggagtmgtagcattagamgttt 77
|||| |||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1806 catattttttgttaacttcagtggataattccggagctggagtagtagcattagaagttt 1747
Query: 78 cagaaccagamtattgctctttttcacttgtttcttcttttccttcttgttcttcaggtt 137
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1746 cagaaccagaatattgctctttttcacttgtttcttcttttccttcttgttcttcaggtt 1687
Query: 138 catcgtcaagagccaaayyctcccagtcatcaatcaacgcttccycttcytcttcgactt 197
||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 1686 catcgtcaagagccaaattctcccagtcatcaatcaacgcttcctcttcttcttcgactt 1627
Query: 198 cytgagtttcagtagctttcttcttctcttcttcgattgcctttycggactcgatttgtt 257
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1626 cttgagtttcagtagctttcttcttctcttcttcgattgccttttcggactcgatttgtt 1567
Query: 258 ccttggtctttctgactcttttaccgtaaacmaccttctttggttttggatgcycatcgc 317
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 1566 ccttggtctttctgactcttttaccgtaaacaaccttctttggttttggatgctcatcgc 1507
Query: 318 cggattttycyagaccagcmaccytgatgttaccggcagccaatagagcagcacgtctgt 377
|||||||| | |||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1506 cggatttttctagaccagcaaccttgatgttaccggcagccaatagagcagcacgtctgt 1447
Query: 378 cttcaagcagtttcttttccyccttttgtttcttagttagaagtttaccctctgcctttm 437
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1446 tttcaagcagtttcttttcctccttttgtttcttagttagaagtttaccctctgccttta 1387
Query: 438 acttttcacgcttagcttgttctctctcacgcttagcctttctagcttcttccttttctt 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1386 acttttcacgcttagcttgttctctctcacgcttagcctttctagcttcttccttttctt 1327
Query: 498 gttcagccttggccaacytttcttcttcttccttctccaatctctcttcttcttccctgg 557
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1326 gttcagccttggccaacttttcttcttcttccttctccaatctctcttcttcttccctgg 1267
Query: 558 ccaacctttcttcttcttctagctgcttttgtaactccaattgacgtttcaaagcagcaa 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1266 ccaacctttcttcttcttctagctgcttttgtaactccaattgacgtttcaaagcagcaa 1207
Query: 618 gaccggctgggaccttcttctttggtgcagcctttggtgccgcaccttcagtggacttgc 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1206 gaccggctgggaccttcttctttggtgcagcctttggtgccgcaccttcagtggacttgc 1147
Query: 678 cagcctccttttcagccttcagtttagaagtttgttcagcatgaagtttcttgttgtttt 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 cagcctccttttcagccttcagtttagaagtttgttcagcatgaagtttcttgttgtttt 1087
Query: 738 ccttctgcgcttgttgctgagccttcttctttgcggcttgttccctcttcttctccttct 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 ccttctgcgcttgttgctgagccttcttctttgcggcttgttccctcttcttctccttct 1027
Query: 798 ccttctccttcttttccttttccttttccttcttggacttcaagactggcttcttagtat 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 ccttctccttcttttccttttccttttccttcttggacttcaagactggcttcttagtat 967
Query: 858 cctcktyttccttcttgtccagcttcttcttwgatttcttcaaagtggacataaaawctt 917
|||| | |||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 966 cctcgtcttccttcttgtccagcttcttcttagatttcttcaaagtggacataaaatctt 907
Query: 918 cctcaatggcagatgcatcggcaacttcggtttcac 953
||||||||||||||||||||||||||||||||||||
Sbjct: 906 cctcaatggcagatgcatcggcaacttcggtttcac 871
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,411
Number of Sequences: 1807
Number of extensions: 11411
Number of successful extensions: 193
Number of sequences better than 1.0e-20: 1
length of query: 957
length of database: 10,358,551
effective HSP length: 16
effective length of query: 941
effective length of database: 10,329,639
effective search space: 9720190299
effective search space used: 9720190299
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)